Protein–RNA interactions for Protein: Q9D783

Klhl40, Kelch-like protein 40, mousemouse

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klhl40Q9D783 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.27■□□□□ 0.04
Klhl40Q9D783 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Klhl40Q9D783 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Klhl40Q9D783 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.27■□□□□ 0.04
Klhl40Q9D783 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Klhl40Q9D783 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Klhl40Q9D783 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.27■□□□□ 0.04
Klhl40Q9D783 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.27■□□□□ 0.04
Klhl40Q9D783 Rprl2-201ENSMUST00000157150 290 ntBASIC15.27■□□□□ 0.04
Klhl40Q9D783 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Klhl40Q9D783 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Klhl40Q9D783 Gm44335-201ENSMUST00000196879 141 ntBASIC15.27■□□□□ 0.04
Klhl40Q9D783 Gm44297-201ENSMUST00000198304 141 ntBASIC15.27■□□□□ 0.04
Klhl40Q9D783 Gm44346-201ENSMUST00000198851 141 ntBASIC15.27■□□□□ 0.04
Klhl40Q9D783 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.27■□□□□ 0.04
Klhl40Q9D783 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.27■□□□□ 0.04
Klhl40Q9D783 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.27■□□□□ 0.04
Klhl40Q9D783 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.27■□□□□ 0.04
Klhl40Q9D783 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Klhl40Q9D783 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Klhl40Q9D783 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Klhl40Q9D783 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Klhl40Q9D783 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Klhl40Q9D783 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.26■□□□□ 0.03
Klhl40Q9D783 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Klhl40Q9D783 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.25■□□□□ 0.03
Klhl40Q9D783 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.25■□□□□ 0.03
Klhl40Q9D783 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Klhl40Q9D783 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Klhl40Q9D783 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.24■□□□□ 0.03
Klhl40Q9D783 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Klhl40Q9D783 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms