Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Gm16198-201ENSMUST00000118766 670 ntBASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Gm11452-201ENSMUST00000122376 690 ntBASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Gm42790-201ENSMUST00000201268 969 ntBASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nop56Q9D6Z1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop56Q9D6Z1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Gm13597-201ENSMUST00000121239 375 ntBASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Gm5479-201ENSMUST00000160578 435 ntBASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms