Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Chchd1-203ENSMUST00000224633 557 ntBASIC16.3■□□□□ 0.2
Ccdc7Q9D541 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc7Q9D541 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Gm24158-201ENSMUST00000175263 71 ntBASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc7Q9D541 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Mir698-201ENSMUST00000102164 109 ntBASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Gm18041-201ENSMUST00000218210 618 ntBASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc7Q9D541 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Gm10253-201ENSMUST00000194270 940 ntBASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Gm5779-201ENSMUST00000218467 910 ntBASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc7Q9D541 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc7Q9D541 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc7Q9D541 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.27■□□□□ 0.19
Ccdc7Q9D541 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Ccdc7Q9D541 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.27■□□□□ 0.19
Ccdc7Q9D541 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc7Q9D541 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.27■□□□□ 0.19
Ccdc7Q9D541 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms