Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Gm13597-201ENSMUST00000121239 375 ntBASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Gm10275-202ENSMUST00000168697 495 ntBASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Gm18733-201ENSMUST00000173950 856 ntBASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.88□□□□□ -0.35
Trim13Q9CYB0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Gm10275-201ENSMUST00000092620 635 ntBASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.88□□□□□ -0.35
Trim13Q9CYB0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim13Q9CYB0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Gm5479-201ENSMUST00000160578 435 ntBASIC12.87□□□□□ -0.35
Trim13Q9CYB0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim13Q9CYB0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Mir5131-201ENSMUST00000175426 93 ntBASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Gm2651-201ENSMUST00000203560 838 ntBASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim13Q9CYB0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms