Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Gm11025-201ENSMUST00000140773 466 ntBASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ssr1Q9CY50 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Gm15467-201ENSMUST00000120582 445 ntBASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr1Q9CY50 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr1Q9CY50 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms