Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cldnd1Q9CQX5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Gm25927-201ENSMUST00000175058 117 ntBASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Gm27320-201ENSMUST00000184892 109 ntBASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldnd1Q9CQX5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Gm26927-201ENSMUST00000182385 965 ntBASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldnd1Q9CQX5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms