Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm43703-201ENSMUST00000200523 763 ntBASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Gm46209-201ENSMUST00000217912 553 ntBASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Gm23757-201ENSMUST00000158353 100 ntBASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Gm44344-201ENSMUST00000200287 129 ntBASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retreg3Q9CQV4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.15□□□□□ -0.15
Retreg3Q9CQV4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Retreg3Q9CQV4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Retreg3Q9CQV4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Gm13505-201ENSMUST00000121666 817 ntBASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Gm27680-201ENSMUST00000184192 160 ntBASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Gm27989-201ENSMUST00000184721 107 ntBASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Gm7775-201ENSMUST00000218871 853 ntBASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Gm9063-201ENSMUST00000223299 582 ntBASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retreg3Q9CQV4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retreg3Q9CQV4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retreg3Q9CQV4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retreg3Q9CQV4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retreg3Q9CQV4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms