Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Gm21722-201ENSMUST00000190153 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm28423-201ENSMUST00000190701 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21899-201ENSMUST00000190745 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21910-201ENSMUST00000191163 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21849-201ENSMUST00000191571 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm28678-201ENSMUST00000191593 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm20910-201ENSMUST00000193268 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21871-201ENSMUST00000194621 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm10175-201ENSMUST00000086013 645 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm38225-201ENSMUST00000194001 393 ntBASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Grk6-205ENSMUST00000224653 2976 ntBASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nipsnap3bQ9CQE1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm45612-201ENSMUST00000211320 160 ntBASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nipsnap3bQ9CQE1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms