Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm15427-201ENSMUST00000117288 531 ntBASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Gm9385-201ENSMUST00000117563 472 ntBASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.17□□□□□ -0.3
Ska1Q9CPV1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Gm17968-201ENSMUST00000194902 784 ntBASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm11543-201ENSMUST00000120758 370 ntBASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm10275-202ENSMUST00000168697 495 ntBASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm44492-201ENSMUST00000197012 141 ntBASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm10275-201ENSMUST00000092620 635 ntBASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.16□□□□□ -0.3
Ska1Q9CPV1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Gm5479-201ENSMUST00000160578 435 ntBASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Gm18737-201ENSMUST00000173594 937 ntBASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.15□□□□□ -0.3
Ska1Q9CPV1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms