Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Gm25144-201ENSMUST00000179561 110 ntBASIC13.88□□□□□ -0.19
Trim33Q99PP7 Gm25352-201ENSMUST00000179815 110 ntBASIC13.88□□□□□ -0.19
Trim33Q99PP7 Gm38294-201ENSMUST00000192831 381 ntBASIC13.88□□□□□ -0.19
Trim33Q99PP7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Mir125a-201ENSMUST00000083545 68 ntBASIC13.88□□□□□ -0.19
Trim33Q99PP7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim33Q99PP7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Gm27533-201ENSMUST00000183800 152 ntBASIC13.87□□□□□ -0.19
Trim33Q99PP7 Gm19087-201ENSMUST00000191430 946 ntBASIC13.87□□□□□ -0.19
Trim33Q99PP7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Gm19324-201ENSMUST00000213229 1169 ntBASIC13.87□□□□□ -0.19
Trim33Q99PP7 Gm16476-201ENSMUST00000221544 139 ntBASIC13.87□□□□□ -0.19
Trim33Q99PP7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim33Q99PP7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.86□□□□□ -0.19
Trim33Q99PP7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Gm44882-201ENSMUST00000205702 802 ntBASIC13.86□□□□□ -0.19
Trim33Q99PP7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.86□□□□□ -0.19
Trim33Q99PP7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim33Q99PP7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Gm15957-201ENSMUST00000118893 974 ntBASIC13.85□□□□□ -0.19
Trim33Q99PP7 Gm15920-201ENSMUST00000118998 402 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms