Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm5523-201ENSMUST00000180415 997 ntBASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gm8385-201ENSMUST00000058999 643 ntBASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Gm7467-201ENSMUST00000185173 652 ntBASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh15Q99PJ1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Gm26956-201ENSMUST00000182176 986 ntBASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Gm44262-201ENSMUST00000204969 372 ntBASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Gm13097-201ENSMUST00000210722 397 ntBASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh15Q99PJ1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Gm27046-201ENSMUST00000182160 463 ntBASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh15Q99PJ1 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Gm25700-201ENSMUST00000177693 110 ntBASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Gm5950-201ENSMUST00000213337 772 ntBASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdh15Q99PJ1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms