Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Gtf2ird2Q99NI3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf2ird2Q99NI3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Gtf2ird2Q99NI3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf2ird2Q99NI3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf2ird2Q99NI3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf2ird2Q99NI3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf2ird2Q99NI3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Gm9797-201ENSMUST00000052902 613 ntBASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Gtf2ird2Q99NI3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.32□□□□□ -0.12
Gtf2ird2Q99NI3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms