Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Matn2-206ENSMUST00000228570 2798 ntBASIC12.23□□□□□ -0.45
Scrt1Q99M85 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.23□□□□□ -0.45
Scrt1Q99M85 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.23□□□□□ -0.45
Scrt1Q99M85 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scrt1Q99M85 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.22□□□□□ -0.45
Scrt1Q99M85 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Gm13392-201ENSMUST00000117708 150 ntBASIC12.22□□□□□ -0.45
Scrt1Q99M85 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.22□□□□□ -0.45
Scrt1Q99M85 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.22□□□□□ -0.45
Scrt1Q99M85 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.22□□□□□ -0.45
Scrt1Q99M85 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Gm5356-201ENSMUST00000093326 615 ntBASIC12.22□□□□□ -0.45
Scrt1Q99M85 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scrt1Q99M85 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.21□□□□□ -0.45
Scrt1Q99M85 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.21□□□□□ -0.45
Scrt1Q99M85 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Gm8062-201ENSMUST00000139696 444 ntBASIC12.21□□□□□ -0.45
Scrt1Q99M85 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Gm5354-201ENSMUST00000182417 973 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms