Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Gm12882-201ENSMUST00000121696 517 ntBASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Gm43818-201ENSMUST00000200605 466 ntBASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Gm45880-201ENSMUST00000213041 853 ntBASIC13.91□□□□□ -0.18
Cstf1Q99LC2 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.91□□□□□ -0.18
Cstf1Q99LC2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Gm14723-201ENSMUST00000118686 215 ntBASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.9□□□□□ -0.18
Cstf1Q99LC2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Efs-202ENSMUST00000227037 2540 ntBASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf1Q99LC2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.9□□□□□ -0.19
Cstf1Q99LC2 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.9□□□□□ -0.19
Cstf1Q99LC2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Cstf1Q99LC2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cstf1Q99LC2 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Gm23931-201ENSMUST00000103842 109 ntBASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Gm15240-201ENSMUST00000118156 720 ntBASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Gm24644-201ENSMUST00000157114 139 ntBASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf1Q99LC2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms