Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.05□□□□□ -0.16
Cdk9Q99J95 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.05□□□□□ -0.16
Cdk9Q99J95 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdk9Q99J95 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.05□□□□□ -0.16
Cdk9Q99J95 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Gm2272-201ENSMUST00000194903 582 ntBASIC14.04□□□□□ -0.16
Cdk9Q99J95 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Rubie-203ENSMUST00000227803 2430 ntBASIC14.04□□□□□ -0.16
Cdk9Q99J95 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.04□□□□□ -0.16
Cdk9Q99J95 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdk9Q99J95 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms