Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Thumpd1Q99J36 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Gm11452-201ENSMUST00000122376 690 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Mir5126-201ENSMUST00000175513 77 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Mir8098-201ENSMUST00000184011 137 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Grk6-205ENSMUST00000224653 2976 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Thumpd1Q99J36 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Gm9385-201ENSMUST00000117563 472 ntBASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Gm11543-201ENSMUST00000120758 370 ntBASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.41□□□□□ -0.42
Thumpd1Q99J36 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.41□□□□□ -0.42
Thumpd1Q99J36 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Thumpd1Q99J36 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms