Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC21.66■■□□□ 1.06
Clip1Q922J3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC21.66■■□□□ 1.06
Clip1Q922J3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip1Q922J3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC21.66■■□□□ 1.06
Clip1Q922J3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clip1Q922J3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC21.66■■□□□ 1.06
Clip1Q922J3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC21.65■■□□□ 1.06
Clip1Q922J3 Gm15198-201ENSMUST00000117283 177 ntBASIC21.65■■□□□ 1.06
Clip1Q922J3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Gm15770-201ENSMUST00000117498 584 ntBASIC21.65■■□□□ 1.06
Clip1Q922J3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Clip1Q922J3 Gm42929-201ENSMUST00000198374 1286 ntBASIC21.65■■□□□ 1.06
Clip1Q922J3 Gm29705-201ENSMUST00000212598 474 ntBASIC21.65■■□□□ 1.06
Clip1Q922J3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC21.65■■□□□ 1.06
Clip1Q922J3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC21.65■■□□□ 1.06
Clip1Q922J3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Clip1Q922J3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Gm12020-201ENSMUST00000119030 2042 ntBASIC21.65■■□□□ 1.06
Clip1Q922J3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Clip1Q922J3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clip1Q922J3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC21.65■■□□□ 1.06
Clip1Q922J3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clip1Q922J3 Gm12203-201ENSMUST00000118235 598 ntBASIC21.64■■□□□ 1.06
Clip1Q922J3 Gm12209-201ENSMUST00000120089 596 ntBASIC21.64■■□□□ 1.06
Clip1Q922J3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC21.64■■□□□ 1.06
Clip1Q922J3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Clip1Q922J3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clip1Q922J3 Gm8565-201ENSMUST00000183259 1014 ntBASIC21.64■■□□□ 1.06
Clip1Q922J3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
Clip1Q922J3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clip1Q922J3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC21.64■■□□□ 1.06
Clip1Q922J3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC21.64■■□□□ 1.06
Clip1Q922J3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clip1Q922J3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clip1Q922J3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clip1Q922J3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clip1Q922J3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clip1Q922J3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC21.64■■□□□ 1.06
Clip1Q922J3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clip1Q922J3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clip1Q922J3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clip1Q922J3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clip1Q922J3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clip1Q922J3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clip1Q922J3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clip1Q922J3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC21.64■■□□□ 1.05
Clip1Q922J3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clip1Q922J3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clip1Q922J3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clip1Q922J3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC21.63■■□□□ 1.05
Clip1Q922J3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC21.63■■□□□ 1.05
Clip1Q922J3 Gm43818-201ENSMUST00000200605 466 ntBASIC21.63■■□□□ 1.05
Clip1Q922J3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC21.63■■□□□ 1.05
Clip1Q922J3 Itm2b-204ENSMUST00000228637 783 ntBASIC21.63■■□□□ 1.05
Clip1Q922J3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Ptprs-211ENSMUST00000223859 5588 ntBASIC21.63■■□□□ 1.05
Clip1Q922J3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Gm8337-201ENSMUST00000187358 1938 ntBASIC21.63■■□□□ 1.05
Clip1Q922J3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Clip1Q922J3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC21.63■■□□□ 1.05
Clip1Q922J3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clip1Q922J3 Gm9755-201ENSMUST00000032981 1356 ntBASIC21.62■■□□□ 1.05
Clip1Q922J3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Clip1Q922J3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC21.62■■□□□ 1.05
Clip1Q922J3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC21.62■■□□□ 1.05
Clip1Q922J3 Gm5370-201ENSMUST00000187187 574 ntBASIC21.62■■□□□ 1.05
Clip1Q922J3 Gm18054-201ENSMUST00000207539 555 ntBASIC21.62■■□□□ 1.05
Clip1Q922J3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC21.62■■□□□ 1.05
Clip1Q922J3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clip1Q922J3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms