Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Gm43575-201ENSMUST00000196420 516 ntBASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdhac1Q91Y10 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Gm23935-201ENSMUST00000102303 57 ntBASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Gm24270-201ENSMUST00000102326 57 ntBASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Gm24245-201ENSMUST00000157318 57 ntBASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Mir6990-201ENSMUST00000183724 91 ntBASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdhac1Q91Y10 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Gm38225-201ENSMUST00000194001 393 ntBASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac1Q91Y10 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms