Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb1Q91Y08 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Gm44344-201ENSMUST00000200287 129 ntBASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Gm6888-201ENSMUST00000221983 706 ntBASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb1Q91Y08 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Gm3436-201ENSMUST00000179930 840 ntBASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Gm38294-201ENSMUST00000192831 381 ntBASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb1Q91Y08 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Gm13453-201ENSMUST00000118708 357 ntBASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Gm15393-201ENSMUST00000120499 219 ntBASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Auts2-212ENSMUST00000178555 309 ntBASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Gm27321-201ENSMUST00000185021 205 ntBASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb1Q91Y08 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms