Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb20Q91XZ9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm11858-201ENSMUST00000117935 838 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm14057-201ENSMUST00000120631 482 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm27680-201ENSMUST00000184192 160 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm43491-201ENSMUST00000197133 784 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm17910-201ENSMUST00000211038 838 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Dupd1-202ENSMUST00000224735 548 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb20Q91XZ9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb20Q91XZ9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pcdhb20Q91XZ9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb20Q91XZ9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb20Q91XZ9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb20Q91XZ9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Gm15515-201ENSMUST00000117827 822 ntBASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 1700016H13Rik-202ENSMUST00000119824 1447 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Gm1848-201ENSMUST00000120711 789 ntBASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Mir1897-201ENSMUST00000122581 272 ntBASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Mir8102-201ENSMUST00000184148 139 ntBASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Gm27989-201ENSMUST00000184721 107 ntBASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb20Q91XZ9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhb20Q91XZ9 Gm37960-201ENSMUST00000192402 1897 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms