Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb22Q91XZ8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb22Q91XZ8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb22Q91XZ8 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.27■□□□□ 0.19
Pcdhb22Q91XZ8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb22Q91XZ8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb22Q91XZ8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb22Q91XZ8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb22Q91XZ8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb22Q91XZ8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Gm43371-201ENSMUST00000202838 1031 ntBASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhb22Q91XZ8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Gm18905-201ENSMUST00000205454 928 ntBASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb22Q91XZ8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Gm22189-201ENSMUST00000103822 86 ntBASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb22Q91XZ8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Gm17795-201ENSMUST00000214505 757 ntBASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Gm9797-201ENSMUST00000052902 613 ntBASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms