Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Gm29361-201ENSMUST00000183323 2000 ntBASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Gm5366-201ENSMUST00000215494 1338 ntBASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Gm43677-201ENSMUST00000198098 2378 ntBASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Gm12813-201ENSMUST00000119615 902 ntBASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 AC154595.3-201ENSMUST00000224579 384 ntBASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Gm37105-201ENSMUST00000192251 2085 ntBASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm23935-201ENSMUST00000102303 57 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm24270-201ENSMUST00000102326 57 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm14822-201ENSMUST00000122247 291 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm24245-201ENSMUST00000157318 57 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm36943-201ENSMUST00000194422 282 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm43037-201ENSMUST00000196808 250 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhb3Q91XZ7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Gm25925-201ENSMUST00000158314 306 ntBASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms