Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Gm24196-201ENSMUST00000179161 110 ntBASIC15.9■□□□□ 0.14
Trex1Q91XB0 Gm29127-201ENSMUST00000188304 517 ntBASIC15.9■□□□□ 0.14
Trex1Q91XB0 Gm42550-201ENSMUST00000201553 960 ntBASIC15.9■□□□□ 0.14
Trex1Q91XB0 Gm6007-201ENSMUST00000208170 823 ntBASIC15.9■□□□□ 0.14
Trex1Q91XB0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.9■□□□□ 0.14
Trex1Q91XB0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.9■□□□□ 0.14
Trex1Q91XB0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Trex1Q91XB0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trex1Q91XB0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.89■□□□□ 0.13
Trex1Q91XB0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Gm27731-201ENSMUST00000185192 107 ntBASIC15.89■□□□□ 0.13
Trex1Q91XB0 Gm29649-201ENSMUST00000185649 419 ntBASIC15.89■□□□□ 0.13
Trex1Q91XB0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.89■□□□□ 0.13
Trex1Q91XB0 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.89■□□□□ 0.13
Trex1Q91XB0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.89■□□□□ 0.13
Trex1Q91XB0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.89■□□□□ 0.13
Trex1Q91XB0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trex1Q91XB0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.88■□□□□ 0.13
Trex1Q91XB0 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.88■□□□□ 0.13
Trex1Q91XB0 Gm45841-201ENSMUST00000207700 164 ntBASIC15.88■□□□□ 0.13
Trex1Q91XB0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.88■□□□□ 0.13
Trex1Q91XB0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trex1Q91XB0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms