Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ddx41Q91VN6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ddx41Q91VN6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx41Q91VN6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx41Q91VN6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx41Q91VN6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx41Q91VN6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx41Q91VN6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx41Q91VN6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Gm6916-202ENSMUST00000205523 195 ntBASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ddx41Q91VN6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ddx41Q91VN6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16■□□□□ 0.15
Ddx41Q91VN6 Gm42612-201ENSMUST00000197986 623 ntBASIC16■□□□□ 0.15
Ddx41Q91VN6 Gm43170-201ENSMUST00000199827 612 ntBASIC16■□□□□ 0.15
Ddx41Q91VN6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16■□□□□ 0.15
Ddx41Q91VN6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ddx41Q91VN6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Ddx41Q91VN6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ddx41Q91VN6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms