Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhb17Q91VD8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb17Q91VD8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb17Q91VD8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhb17Q91VD8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhb17Q91VD8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm13453-201ENSMUST00000118708 357 ntBASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm13924-201ENSMUST00000119899 486 ntBASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm14417-201ENSMUST00000120036 1074 ntBASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm6182-201ENSMUST00000156439 1208 ntBASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm29755-201ENSMUST00000196976 948 ntBASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm6888-201ENSMUST00000221983 706 ntBASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhb17Q91VD8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Gm14767-201ENSMUST00000121559 586 ntBASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Gm42588-201ENSMUST00000200538 1297 ntBASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhb17Q91VD8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdhb17Q91VD8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms