Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.55□□□□□ -0.4
Odf4Q8VI88 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.55□□□□□ -0.4
Odf4Q8VI88 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Odf4Q8VI88 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Odf4Q8VI88 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Odf4Q8VI88 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Odf4Q8VI88 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Odf4Q8VI88 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Odf4Q8VI88 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Odf4Q8VI88 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.54□□□□□ -0.4
Odf4Q8VI88 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Gm8410-201ENSMUST00000117225 605 ntBASIC12.54□□□□□ -0.4
Odf4Q8VI88 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Gm27622-201ENSMUST00000183779 60 ntBASIC12.54□□□□□ -0.4
Odf4Q8VI88 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.54□□□□□ -0.4
Odf4Q8VI88 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.54□□□□□ -0.4
Odf4Q8VI88 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.53□□□□□ -0.4
Odf4Q8VI88 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.53□□□□□ -0.4
Odf4Q8VI88 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Gm9824-201ENSMUST00000178707 561 ntBASIC12.53□□□□□ -0.4
Odf4Q8VI88 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.53□□□□□ -0.4
Odf4Q8VI88 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.53□□□□□ -0.4
Odf4Q8VI88 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Odf4Q8VI88 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Odf4Q8VI88 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms