Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.41□□□□□ -0.1
Trim60Q8VI40 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.41□□□□□ -0.1
Trim60Q8VI40 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.41□□□□□ -0.1
Trim60Q8VI40 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.41□□□□□ -0.1
Trim60Q8VI40 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Matn2-206ENSMUST00000228570 2798 ntBASIC14.41□□□□□ -0.1
Trim60Q8VI40 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.41□□□□□ -0.1
Trim60Q8VI40 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.4□□□□□ -0.1
Trim60Q8VI40 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.4□□□□□ -0.1
Trim60Q8VI40 Gm18049-201ENSMUST00000208909 581 ntBASIC14.4□□□□□ -0.1
Trim60Q8VI40 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.4□□□□□ -0.1
Trim60Q8VI40 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim60Q8VI40 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Gm15467-201ENSMUST00000120582 445 ntBASIC14.39□□□□□ -0.11
Trim60Q8VI40 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.39□□□□□ -0.11
Trim60Q8VI40 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.39□□□□□ -0.11
Trim60Q8VI40 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.39□□□□□ -0.11
Trim60Q8VI40 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms