Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Gm13464-201ENSMUST00000119418 935 ntBASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdh18Q8VHR0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Gm8749-201ENSMUST00000117737 331 ntBASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdh18Q8VHR0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Gm13597-201ENSMUST00000121239 375 ntBASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdh18Q8VHR0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh18Q8VHR0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh18Q8VHR0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh18Q8VHR0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh18Q8VHR0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Pcdh18Q8VHR0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdh18Q8VHR0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Gm16026-204ENSMUST00000162652 683 ntBASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh18Q8VHR0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms