Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Gm7862-201ENSMUST00000121461 292 ntBASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Gm10275-202ENSMUST00000168697 495 ntBASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Gm10275-201ENSMUST00000092620 635 ntBASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpa1Q8VEE4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Gm25925-201ENSMUST00000158314 306 ntBASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpa1Q8VEE4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Gm13884-201ENSMUST00000118103 829 ntBASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Gm10154-201ENSMUST00000084445 354 ntBASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpa1Q8VEE4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms