Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Gm24543-201ENSMUST00000103867 82 ntBASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Gm5566-201ENSMUST00000116118 459 ntBASIC12.74□□□□□ -0.37
Nkd2Q8VE28 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Gm9719-201ENSMUST00000162765 543 ntBASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkd2Q8VE28 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Gm15487-201ENSMUST00000122373 465 ntBASIC12.73□□□□□ -0.37
Nkd2Q8VE28 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Gm16215-201ENSMUST00000161990 637 ntBASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Syt7-205ENSMUST00000224135 1557 ntBASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkd2Q8VE28 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.72□□□□□ -0.37
Nkd2Q8VE28 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms