Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Gm15957-201ENSMUST00000118893 974 ntBASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Gm7653-201ENSMUST00000214567 508 ntBASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ndc1Q8VCB1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm12490-201ENSMUST00000120255 560 ntBASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm23984-201ENSMUST00000157139 203 ntBASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ndc1Q8VCB1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms