Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Mir125a-201ENSMUST00000083545 68 ntBASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps39Q8R5L3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.96□□□□□ -0.17
Vps39Q8R5L3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.96□□□□□ -0.17
Vps39Q8R5L3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vps39Q8R5L3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.96□□□□□ -0.18
Vps39Q8R5L3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vps39Q8R5L3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Gm5566-201ENSMUST00000116118 459 ntBASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Gm9719-201ENSMUST00000162765 543 ntBASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Acot6-202ENSMUST00000222921 3622 ntBASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vps39Q8R5L3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms