Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccdc58Q8R3Q6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc58Q8R3Q6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc58Q8R3Q6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc58Q8R3Q6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc58Q8R3Q6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc58Q8R3Q6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc58Q8R3Q6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc58Q8R3Q6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc58Q8R3Q6 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gm7862-201ENSMUST00000121461 292 ntBASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gm28033-201ENSMUST00000184224 96 ntBASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gm37230-201ENSMUST00000194491 818 ntBASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gm34391-201ENSMUST00000203706 907 ntBASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gm45098-201ENSMUST00000207179 657 ntBASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc58Q8R3Q6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc58Q8R3Q6 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms