Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm13223-201ENSMUST00000118609 747 ntBASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Gm17837-201ENSMUST00000186435 985 ntBASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Atf7Q8R0S1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Atf7Q8R0S1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Gm13453-201ENSMUST00000118708 357 ntBASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Gm3436-201ENSMUST00000179930 840 ntBASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Atf7Q8R0S1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Gm15393-201ENSMUST00000120499 219 ntBASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Atf7Q8R0S1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Atf7Q8R0S1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms