Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sf3a1Q8K4Z5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Gm29667-201ENSMUST00000190817 490 ntBASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Gm10766-202ENSMUST00000194123 606 ntBASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sf3a1Q8K4Z5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Gm4804-201ENSMUST00000182234 999 ntBASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sf3a1Q8K4Z5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sf3a1Q8K4Z5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms