Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf39Q8K2Z2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf39Q8K2Z2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf39Q8K2Z2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf39Q8K2Z2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf39Q8K2Z2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Prpf39Q8K2Z2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf39Q8K2Z2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf39Q8K2Z2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Gm4875-201ENSMUST00000118257 786 ntBASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Gm10766-202ENSMUST00000194123 606 ntBASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Prpf39Q8K2Z2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Prpf39Q8K2Z2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf39Q8K2Z2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf39Q8K2Z2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms