Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Mir7684-201ENSMUST00000183858 60 ntBASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Gm43930-201ENSMUST00000203868 845 ntBASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn1Q8K0T0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Rtn1Q8K0T0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn1Q8K0T0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn1Q8K0T0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn1Q8K0T0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Rtn1Q8K0T0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn1Q8K0T0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rtn1Q8K0T0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Auts2-212ENSMUST00000178555 309 ntBASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Gm4804-201ENSMUST00000182234 999 ntBASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rtn1Q8K0T0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rtn1Q8K0T0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rtn1Q8K0T0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms