Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smc5Q8CG46 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.23■□□□□ 0.35
Smc5Q8CG46 Gm18049-201ENSMUST00000208909 581 ntBASIC17.23■□□□□ 0.35
Smc5Q8CG46 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Mir497b-201ENSMUST00000093601 125 ntBASIC17.23■□□□□ 0.35
Smc5Q8CG46 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smc5Q8CG46 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Gm18889-201ENSMUST00000174284 929 ntBASIC17.22■□□□□ 0.35
Smc5Q8CG46 Gm18766-201ENSMUST00000189811 808 ntBASIC17.22■□□□□ 0.35
Smc5Q8CG46 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.22■□□□□ 0.35
Smc5Q8CG46 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.22■□□□□ 0.35
Smc5Q8CG46 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smc5Q8CG46 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.21■□□□□ 0.35
Smc5Q8CG46 Gm5566-201ENSMUST00000116118 459 ntBASIC17.21■□□□□ 0.35
Smc5Q8CG46 Gm15467-201ENSMUST00000120582 445 ntBASIC17.21■□□□□ 0.35
Smc5Q8CG46 Gm13365-201ENSMUST00000121188 973 ntBASIC17.21■□□□□ 0.35
Smc5Q8CG46 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.21■□□□□ 0.35
Smc5Q8CG46 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.21■□□□□ 0.35
Smc5Q8CG46 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.21■□□□□ 0.35
Smc5Q8CG46 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smc5Q8CG46 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Smc5Q8CG46 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smc5Q8CG46 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smc5Q8CG46 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smc5Q8CG46 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.2■□□□□ 0.34
Smc5Q8CG46 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.2■□□□□ 0.34
Smc5Q8CG46 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smc5Q8CG46 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms