Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fam228aQ8CDW1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Gm15957-201ENSMUST00000118893 974 ntBASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Rpph1-201ENSMUST00000175096 319 ntBASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fam228aQ8CDW1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Gm6973-201ENSMUST00000117080 721 ntBASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Gm2445-201ENSMUST00000182798 989 ntBASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Gm2651-201ENSMUST00000203560 838 ntBASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fam228aQ8CDW1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Fam228aQ8CDW1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam228aQ8CDW1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam228aQ8CDW1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Fam228aQ8CDW1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.6□□□□□ -0.07
Fam228aQ8CDW1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam228aQ8CDW1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fam228aQ8CDW1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms