Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim52Q8CDV4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Gm8062-201ENSMUST00000139696 444 ntBASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Gm45841-201ENSMUST00000207700 164 ntBASIC17.09■□□□□ 0.33
Trim52Q8CDV4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim52Q8CDV4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim52Q8CDV4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim52Q8CDV4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.08■□□□□ 0.33
Trim52Q8CDV4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Gm23931-201ENSMUST00000103842 109 ntBASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Gm16177-201ENSMUST00000120728 718 ntBASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim52Q8CDV4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Gm27331-201ENSMUST00000183705 60 ntBASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim52Q8CDV4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim52Q8CDV4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim52Q8CDV4 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.06■□□□□ 0.32
Trim52Q8CDV4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim52Q8CDV4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim52Q8CDV4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms