Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Gm37917-201ENSMUST00000194711 392 ntBASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shisa4Q8CA71 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.1■□□□□ 0.17
Shisa4Q8CA71 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm18018-201ENSMUST00000198273 408 ntBASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm9908-201ENSMUST00000211534 448 ntBASIC16.1■□□□□ 0.17
Shisa4Q8CA71 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.1■□□□□ 0.17
Shisa4Q8CA71 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Gm13689-201ENSMUST00000119360 685 ntBASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Gm6266-201ENSMUST00000203844 806 ntBASIC16.09■□□□□ 0.17
Shisa4Q8CA71 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shisa4Q8CA71 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Shisa4Q8CA71 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shisa4Q8CA71 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shisa4Q8CA71 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shisa4Q8CA71 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shisa4Q8CA71 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Shisa4Q8CA71 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Shisa4Q8CA71 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms