Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cfap54Q8C6S9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Gm11591-201ENSMUST00000120063 702 ntBASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Rps4l-202ENSMUST00000204242 789 ntBASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cfap54Q8C6S9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm16379-201ENSMUST00000161469 348 ntBASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm8762-201ENSMUST00000193486 339 ntBASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm4909-201ENSMUST00000118749 794 ntBASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm4986-201ENSMUST00000119731 549 ntBASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm27320-201ENSMUST00000184892 109 ntBASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm7593-201ENSMUST00000187246 644 ntBASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.09□□□□□ -0.31
Cfap54Q8C6S9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cfap54Q8C6S9 Gm29741-201ENSMUST00000192667 421 ntBASIC13.08□□□□□ -0.31
Cfap54Q8C6S9 AU022133-201ENSMUST00000200601 873 ntBASIC13.08□□□□□ -0.31
Cfap54Q8C6S9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cfap54Q8C6S9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cfap54Q8C6S9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cfap54Q8C6S9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cfap54Q8C6S9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Cfap54Q8C6S9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap54Q8C6S9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap54Q8C6S9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap54Q8C6S9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Cfap54Q8C6S9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap54Q8C6S9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cfap54Q8C6S9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Cfap54Q8C6S9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cfap54Q8C6S9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cfap54Q8C6S9 Gm24990-201ENSMUST00000157406 323 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms