Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc60Q8C4J0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Gm2445-201ENSMUST00000182798 989 ntBASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Gm20445-201ENSMUST00000061905 565 ntBASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc60Q8C4J0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
Ccdc60Q8C4J0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Gm24694-201ENSMUST00000180054 110 ntBASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Gm8927-201ENSMUST00000181978 981 ntBASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Gm27663-201ENSMUST00000184839 110 ntBASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Gm3222-201ENSMUST00000071282 990 ntBASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc60Q8C4J0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ccdc60Q8C4J0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Gm13385-201ENSMUST00000121089 220 ntBASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Gm16215-201ENSMUST00000161990 637 ntBASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Gm21854-201ENSMUST00000179901 471 ntBASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ccdc60Q8C4J0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms