Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Gm17795-201ENSMUST00000214505 757 ntBASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Gm9797-201ENSMUST00000052902 613 ntBASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp44Q8C2S0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp44Q8C2S0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp44Q8C2S0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp44Q8C2S0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp44Q8C2S0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp44Q8C2S0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp44Q8C2S0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp44Q8C2S0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp44Q8C2S0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp44Q8C2S0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp44Q8C2S0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Gm14057-201ENSMUST00000120631 482 ntBASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.26■□□□□ 0.19
Usp44Q8C2S0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp44Q8C2S0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp44Q8C2S0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms