Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Gm13223-201ENSMUST00000118609 747 ntBASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Gm14767-201ENSMUST00000121559 586 ntBASIC14.38□□□□□ -0.11
Trub1Q8C0D0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Gm27321-201ENSMUST00000185021 205 ntBASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Gm17837-201ENSMUST00000186435 985 ntBASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Gm43703-201ENSMUST00000200523 763 ntBASIC14.38□□□□□ -0.11
Trub1Q8C0D0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.38□□□□□ -0.11
Trub1Q8C0D0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trub1Q8C0D0 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trub1Q8C0D0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Gm15393-201ENSMUST00000120499 219 ntBASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.36□□□□□ -0.11
Trub1Q8C0D0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trub1Q8C0D0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms