Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf2Q8BZT2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Gm8584-201ENSMUST00000171982 758 ntBASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Gm27892-201ENSMUST00000185017 106 ntBASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Gm5356-201ENSMUST00000093326 615 ntBASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf2Q8BZT2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Mir698-201ENSMUST00000102164 109 ntBASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Gm13829-201ENSMUST00000119600 138 ntBASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Gm26464-201ENSMUST00000157094 305 ntBASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Gm17150-201ENSMUST00000165577 381 ntBASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf2Q8BZT2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Sh3rf2Q8BZT2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sh3rf2Q8BZT2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sh3rf2Q8BZT2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sh3rf2Q8BZT2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sh3rf2Q8BZT2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.08□□□□□ -0.15
Sh3rf2Q8BZT2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms