Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Gm25927-201ENSMUST00000175058 117 ntBASIC10.84□□□□□ -0.67
Chd9Q8BYH8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd9Q8BYH8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm12029-201ENSMUST00000120073 832 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm13611-201ENSMUST00000118269 318 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm13570-201ENSMUST00000140763 309 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm21470-201ENSMUST00000187680 696 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm37905-201ENSMUST00000195310 341 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm25261-201ENSMUST00000157416 134 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm4271-201ENSMUST00000174444 973 ntBASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chd9Q8BYH8 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd9Q8BYH8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms