Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm9908-201ENSMUST00000211534 448 ntBASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap1Q8BTW8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm12341-201ENSMUST00000119724 503 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm8584-201ENSMUST00000171982 758 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm8927-201ENSMUST00000181978 981 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm3222-201ENSMUST00000071282 990 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdk5rap1Q8BTW8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm29741-201ENSMUST00000192667 421 ntBASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdk5rap1Q8BTW8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdk5rap1Q8BTW8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms