Protein–RNA interactions for Protein: Q8BPK2

Zcchc3, Zinc finger, CCHC domain-containing 3, mousemouse

Known RBP Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc3Q8BPK2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Gm5312-201ENSMUST00000203728 547 ntBASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Dupd1-202ENSMUST00000224735 548 ntBASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zcchc3Q8BPK2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zcchc3Q8BPK2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Mir449b-201ENSMUST00000104833 80 ntBASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Gm37935-201ENSMUST00000192012 982 ntBASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zcchc3Q8BPK2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms