Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Gm44069-201ENSMUST00000204898 506 ntBASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 AC022775.2-201ENSMUST00000227885 646 ntBASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Gm16372-201ENSMUST00000073088 450 ntBASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col16a1Q8BLX7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col16a1Q8BLX7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col16a1Q8BLX7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Gm11964-201ENSMUST00000120982 444 ntBASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col16a1Q8BLX7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Gm9445-201ENSMUST00000207454 1285 ntBASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Gm5363-201ENSMUST00000211927 938 ntBASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col16a1Q8BLX7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms